rs262027440 SNP Detail

Summary

• ID
  rs262027440
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13285422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTGCTGTC CCTGAATCAG
  GAGGTTTAGA AAATAGGAAC TTCCCAGCTG GTGAGTTTTC TGTCCTTAAT AAACCAGATG
  TGTTCTCTGG AATTCATGCC ACTGTGGGTC TTTTTATCAT GCTCTATTTT GTATTTTTGC
  CTATGAAAGT CCCTGCATTA GAATTAGCCA TGATTTAAGT CATTATGCCT TTCAGTTTTC
  R
  TCTTTTATGT CTGAAAGTTG AATGCACACA ATAGTAATGA CTAAATTCCA CCCTACATTC
  TTCCATCTTC ATCATTTCTT TCTCTTAACT ACACTTGCCA TTTTTAGCTT ACTGATTTAA
  TCCCTTAAAA ACTCTGTCCT CTCATGTAAC TTTTAGTTGG TTTTGGATTA CTTCCAACTT
  GTGTTTGTTC CTCAGGAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321747513	CHEV_6_13235423	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262027440					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13285422 () rs orientation: forward

Symbol	Name	Function Class
Rr626565	regulatory region 626565	1604 bp proximal