rs262023648 SNP Detail

Summary

• ID
  rs262023648
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137311188 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atgagtaca ctgtagctgt cttcaaccag
  aagagggcat cagatcccat tacaggtggt tgtgagccat catgtggttg ctgggaattg
  aactcaggac atctggaagg gtagtcagtg ttcttaacca ctgagctccc cccccCTTAC
  Y
  cccggcgcca tatttcctac tttcctggcc cttgcacaat agtcttaacc tttagtttct
  caattctctt ttgtacaaaa tggggacaac actaaaatac cttattgaca tagtgggaaa
  tgtcatgtta aattaacaat gtaaaTTTAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321365390	CHEV_4_137139792	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262023648					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137311188 () rs orientation: forward

Symbol	Name	Function Class
Gm70277	predicted gene, 70277	within coordinates
Ldlrad2	low density lipoprotein receptor class A domain containing 2	1773 bp upstream
Rr602653	regulatory region 602653	1871 bp distal
Rr602654	regulatory region 602654	1654 bp distal