rs261988026 SNP Detail

Summary

• ID
  rs261988026
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:107512415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTCTTCATT TGTATCCATC ATAATAAGCA
  TAATCAAGTA CAGTGCACag tcaggaaagc tcagagcagt tcccagctct gatactaatg
  ccgggatgta tgaccttCCT TGATGTATGA TGTCCTGCAA ATATCCTGAT GCTTTCTATC
  Y
  CTGTCACAGT GCTGTTGTAA AGGATCCAGG GAAGCTGCTA GATGCTTCTA GGACTGTTAC
  TGCAAGGAAC CAGACTTCTG ATCCGATGCT GTGATTTTTT TTTTTTTTTT TTGATAGCTA
  ATGGTCAAGA AAACAACAGC ACCTTTTTCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321890195	CHEV_6_107485448	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261988026					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:107512415 () rs orientation: forward

Symbol	Name	Function Class
Lrrn1	leucine rich repeat protein 1, neuronal	Intron
Rr636003	regulatory region 636003	55 bp distal