rs261973281 SNP Detail

Summary

• ID
  rs261973281
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:88966580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTCTTCTGC CTCCTGAGTG CTGGGATTAA AGGTGTACAC
  CACCTCATCC GGCCGAACTC AATCTTCTCT TAATTCAGTC AAGTTATCTT AACTGCTCAA
  Y
  TTCCTGCCCC TCATTCTACC TGTCGACAGA GATAAAGAAT TATAGAGCAA ATAACCTCTA
  GTCTTGAACA TATCAATTTG AGTTTATCAT TTATAATTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320836483	CHEV_3_88863195	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261973281					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:88966580 () rs orientation: forward

Symbol	Name	Function Class
Ash1l	ASH1 like histone lysine methyltransferase	Intron
Rr579938	regulatory region 579938	200 bp distal
Rr579939	regulatory region 579939	272 bp distal