rs261822106 SNP Detail

Summary

• ID
  rs261822106
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148332362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAACTGATA CGCTATCTTT
  ATTGTTAATG GTATCATATT TAGAATCACC CAAGAGATAT CAAGGAAAAC TTGTAGGCTT
  CTAGGAAATA TTGAGGGAAG GAGAAAGACT CGTCCCACAG ACTGGGGTCC CAGGAGCAAC
  AAGAGAGGAG ATGGCTGGAG TACCAGGGGC ATTCTCATCA CTTCGAGGTG TTTCCTCTCA
  Y
  GATGGACTGA ACCCTCTGAA ACCATGAATT AGAATAAATC TTGTCTTTCA TAAGTTATCT
  CTGTCCTTCT CCCCCTGCCC CCTTTTTGGT ATCAGCAACG AAAAACCAAT TAATATAGGT
  ACTAAGTTTT ATAGAATGTT TTACCAAAAA ATAAAAAAGG CAACTCTGAC TCAGCCTGGG
  ATTGTCCTCA CTGGGTTAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321418503	CHEV_4_147622014	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261822106					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148332362 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Disp3	dispatched RND transporter family member 3			Intron
				Noncoding-Transcript-Variant
Rr604634	regulatory region 604634			1549 bp proximal
Rr604635	regulatory region 604635			1614 bp proximal