rs261804059 SNP Detail

Summary

• ID
  rs261804059
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:58662927 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACATGT GCATGAACAG
  ACTTGCACAC ACACACACAC ACACACACAC AGACAACACA GTATCGACAG TTACCCTCAT
  GAACATGGTA TTCAACTAGG AGCTAAGACT CACTATGACT GTCCAGCAAC AGGAGCACAC
  ACTGCACCAG ATAACACTAG TCCACAATAC AAGCAAAACT GAACGAGAAA GGACAGCTCC
  Y
  AACGAATGCA TACAGCTTTC ATGTCACTAA AATTAAATTG AAAACCCCTA AGTCAAAGCA
  TTATAGATCA GGATCCAGCT CTGTGTGTGC AAAGCTGCCC ATAACTTTAT TTCAGCTATA
  GAAATGAAAA ACAGGCAAGA AATACAACAT GGTTAAACAG CCATTAATGG TGACTGCAAA
  AGTATCTATG CATGAGAACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321138687	CHEV_4_58675799	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261804059					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58662927 () rs orientation: forward

Symbol	Name	Function Class
Rr592922	regulatory region 592922	642 bp distal
Rr592923	regulatory region 592923	742 bp proximal