rs261695004 SNP Detail

Summary

• ID
  rs261695004
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115614947 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGAGGAAAA GGGGAGAGAG AACTGCATAA
  ACCAACGGGC AAATGTTCAC GGAACAAGTG TAACCTAATG AAAATTTAGC TCACAGGACT
  GAGAGGGGGC AATGTGGGTG AACagtgtga gagcctgact tcagtcccca ggacctgtga
  Y
  agaaggagag caccaactTG TGAGAGCtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
  gtgacttgta ggagtcacat ctctcctacc atgtgggatc cagggataga agtcaggtca
  tctggcttgg tagtaagtgc ctccacctcc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320893329	CHEV_3_115524216	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261695004					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115614947 () rs orientation: forward

Symbol	Name	Function Class
Rr583609	regulatory region 583609	720 bp distal
Rr583610	regulatory region 583610	1265 bp proximal