rs261548449 SNP Detail

Summary

• ID
  rs261548449
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:92197780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atagccttg actatcttgg aacttgtgct
  gtacaccggg ctggccttga actcacagcg acccacctgc gtgtgactag gattaaaggc
  atgtgtcgct aACTGGCAGG TTGcttgttc ttcttttcca ataatccatt tagtccagtt
  W
  gtgctgccta taagctcctg ggtgggggcc atgtactgga gcatgactga gctttcggtg
  gccacgccct taaagaaagc tgactctcac tccccagaaa ccatcaactc tccacagcgc
  ctcagttaga agggagactt gtgaactctt                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321852800	CHEV_6_92170793	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261548449					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:92197780 () rs orientation: forward

Symbol	Name	Function Class
Rr634622	regulatory region 634622	910 bp distal
Rr634623	regulatory region 634623	1137 bp distal
Rr634624	regulatory region 634624	913 bp distal
Rr634625	regulatory region 634625	853 bp proximal