rs261489271 SNP Detail

Summary

• ID
  rs261489271
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109487004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACTGTTCT GTGTGTAGTT
  CTAGTCTAGA ATATAATCTG GCCTTTAAAA GTGTTATTCT GAAATTTCTT TTTCTCCTCT
  GGGCATTTTT ATTTAGTCTA TTTCCCTGCA GAGAAATACA TTTACTTATA GAGTCAGAAG
  ATGCACATTT AACTCTTTAT AATTTACTCT ATAGTCAGTT TTCTACAATC CTTTAGATTA
  C
  TTAAAGGAAT ATATGGTGAA TTTTCAGATT ATAAATATGG CCAAGTAGAT AAGTAACCAA
  ACAGATAAAG TCCTGCATGA AAAATAAGTT TACAAATTTT CAAAAGGTGC GTCTGTACCT
  TATAGAACAT TTTCCTGTAG TTTTGCTATT TGCATGTGAG TGCCTTTTCC ACTCACCACA
  TTTCTATGAA GAAACAAAGG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320870034	CHEV_3_109382606	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261489271					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109487004 () rs orientation: forward

Symbol	Name	Function Class
Rr583434	regulatory region 583434	417 bp distal
Vav3	vav 3 oncogene	Intron