rs261452489 SNP Detail

Summary

• ID
  rs261452489
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:107029595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAGAGAGC TATTAAGTAG
  AGAAGGCTCA GCAGATATCA GATACCTGGC CAAAACTCCG AGCAACACAG GATGGGCCAG
  AGGAAAGATA ACTGCACACC TTCAGGGGAC ACCCTTCCCT TCTGCATATT CCATTTTTAA
  GGAGCCCTTG AAAGAGCTGT TTCATTATTC AACACTCTAC CATTTTTGCC CCTGTACCAT
  R
  CCTTTATTTT TTTTTTATTC TACTTTCAGT ACGTTCTTTA CTGTATTTTT TGTTAAGCTC
  TTCTCTTCAA ACATTTTCTT TCCCTTTCTA CATCCACCTT AATGATTGGT CTTTAAGTTT
  TCTCATTATT GTAAAGCCCC CTTTCCCCTC TTTTTTTATT CCAATCTCTT GCCCTCTTTT
  TCTTTTCCTC CATAATGTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321888037	CHEV_6_107002628	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261452489					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:107029595 () rs orientation: forward

Symbol	Name	Function Class
Rr379902	regulatory region 379902	within coordinates
Rr635986	regulatory region 635986	305 bp distal