rs261272980 SNP Detail

Summary

• ID
  rs261272980
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117384146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTCTGTTT AAAAAGGCCA CACTTCATGT
  TCCTTCCACA TCCATTTAAG TGGAACCTAC AGAGGCCAGC ACAGGGCCAA TCACTGAAGA
  AAACTACCTT TTGTTATTTT ATGTAAGGAA GAAATTTAAA AATTCAGCTT GCAAAAAGAG
  M
  GACCCAAACC CCTACTTTCT TCCCTTAAAC CTCTCTCCAT GTTTATTGCC CACCATAAAT
  TTCTTTAAAA AGGCAACCGA TGCAGTAAAA CCGTCACAAC AAAGCTGAAA CAAGTACGCA
  AGCCCAGGCA GAGGCCAGAT TTATGGTCAG                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321922300	CHEV_6_117357203	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261272980					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117384146 () rs orientation: forward

Symbol	Name	Function Class
Rr637316	regulatory region 637316	within coordinates
Rr637317	regulatory region 637317	1875 bp proximal
Rr637318	regulatory region 637318	1940 bp proximal