rs261219274 SNP Detail

Summary

• ID
  rs261219274
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141408783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTGACAGG ATCAACACTG
  GGTTCACACT GATGTGATCT TACTCCTACA GTGACTTAAG TGAAAGCTGA CTCCAAAGTA
  CCACTAATGT GATGTTCCTC AACGCCTTCT GTTCTAGAAT TGTTCAGTTT AAGCCAATCA
  ATTCCTAACG AATCCCTAAC TTCATCCAAA CTTCAGACAA AAGATTGTTT TTTTTTTTTT
  T
  AATGTACTTT TTAAGACAGG GTGTCACTAA TGTAGCTGGC CTTGACCTCA AATATCACTT
  GCCTCCTAGA ATGAACGGTA TGTCAGCTTG CCTGGACTTT TGATTTTATT TATTATTCAC
  AGATCTTAAA AATCAAAAGC AACTATTTGT TGCAAAGAAA ATAACAACCA AAAGAACAAA
  GTATTTGGCA AGTGAGTCCA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321388965	CHEV_4_141237387	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261219274					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141408783 () rs orientation: forward

Symbol	Name	Function Class
Rr377311	regulatory region 377311	1200 bp downstream
Rr603858	regulatory region 603858	321 bp proximal
Tssr44357	transcription start site region 44357	1921 bp upstream