rs261178960 SNP Detail

Summary

• ID
  rs261178960
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4407550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGCCCCAA ATACAGGGTA
  AAGGCAGATT TTAATCAGAG TCGTTTCCTT AGATGTTCAT CTGAATATCT GCAGTGAAGT
  CTGGCCCATT GTAAGTGATC CATAGATAAT AAAGAAAAAT TTAGTGCTAT AGAGTTACAA
  ATAAAGAACG TTTGAAATAA CTGATACCTA TCATTTTTAA AGTGAGGGAG AAGAGCAGTG
  K
  CGGAAAAAGA TCTTGAAGGA CTAGCAGTAA TGCAATAAGA TAAGAAAAAT ATGAGAAGAT
  GGTCTCATGA GGGGAACAAC AGAATTAACA ACCATAATAA GCATTATGTG GGACAGTGTG
  GTACTTTCAG TCAAGTCATA GGTATACGGG AAACAGTTCT AAAGGAATCC TCAAAAACAA
  AGAAAGGTGT AAGAGTCTTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321727396	CHEV_6_4357550	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261178960					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4407550 () rs orientation: forward

Symbol	Name	Function Class
Rr626010	regulatory region 626010	282 bp proximal
Rr626011	regulatory region 626011	364 bp proximal