rs261162032 SNP Detail

Summary

• ID
  rs261162032
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115669849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ccaggcagg cccctggcaG TGAGGGAAGG
  AGAGGTCATA GATATGAATA AAGTCACAGA GGGAGCATAA ATTATTAAAC GTGAAAAGAT
  CAGCAGCATC ATAGTAGGAG GAAACACACC ATGAGACCCT GAGGCCACAC CCCATTCCAC
  Y
  TCCCTTCCAA GTCAACATCA ATAAAACAtt tgtgttcggt gctggagatg gaacccagga
  cctggagggc tcagtaagtg ctttcctact ggcccccatg tccatcttcT TAAAGtattt
  ttctttgttg ctgcttattt atttatttat                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321916381	CHEV_6_115642906	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261162032					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115669849 () rs orientation: forward

Symbol	Name	Function Class
Rr637022	regulatory region 637022	within coordinates
Rr637023	regulatory region 637023	206 bp proximal
Rr637024	regulatory region 637024	469 bp proximal
Rr637025	regulatory region 637025	1276 bp proximal