rs261147344 SNP Detail

Summary

• ID
  rs261147344
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:32303825 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTTCAAC AGGTTCACAA
  GTAAAGCATT AGAGACTTAT CACAGAAAAC CCACTCTTTA GTCCTCCGCC TCCCCCTTTG
  GATCAATGAA AAATTTGCAT GAACAAATGA GGTGCTATAA ATCTTACCAT TTCTCAGACC
  TAGGTATATA CTATTGTGTC GTGTTATATT TAATTAGGCT GCATTGGGTT AAATGTACTG
  K
  ACTGGAAGAG ACTGAACTGG CTTCAATTGG ACTGGAGTAG ACTAAGTTAG GTTGGGTTAG
  ATTAGGTTGA ATTAAGTCGG GTTGAATGGA ATTGAATTGG GTTGGCTTTA CTGGTCTTTG
  TGTGAATTAA GCAAGTTTGG ATATACCAAG TCTTTCCTGA TTGCTTACAT TCTGTGGTAT
  CCAATACTCA CTCGATAACT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321777563	CHEV_6_32276890	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261147344					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32303825 () rs orientation: forward

Symbol	Name	Function Class
Plxna4	plexin A4	Intron
Rr628093	regulatory region 628093	221 bp proximal
Rr628094	regulatory region 628094	1097 bp proximal
Rr628095	regulatory region 628095	1390 bp proximal