rs261122047 SNP Detail

Summary

• ID
  rs261122047
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:76037174 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTCTTGCT TAGAGGCTAA
  TCCTGGTGGA GCATGCTCGA ACGTGTCTAT TCTGTGACCA CCCCCGACCC CACCCCCACC
  CCCTACCCCA CCCCACCCCA CCCCCACCTA AGTAATCTGC CCAAACTACT AGAAAAACCT
  TTGTATATCT CCAACTTGGT CATTGCAATA TGGCTTCAAT ACTTCACACA GAAGATAGAG
  W
  CCGAGGGGGT AAACACCTAG AGATCGCCAT TCCCAGGGTT GCTTACGTGA ACATCTGCAA
  GCTCAGGGCA GGAAGCTTGT CATAGAGACA GCCTGGAGCT GGAAGGAAGG AGCATCCCTA
  ACTCAAAGTC CTTTAGCCAG CGTCCAGGGT GCAGAGACTG GCATCTGGTG CACTTGGCTT
  TAGGCAGCCT AGACTCATTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321571973	CHEV_5_76272539	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261122047					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:76037174 () rs orientation: forward

Symbol	Name	Function Class
Gm73081	predicted gene, 73081	within coordinates
Rr613502	regulatory region 613502	684 bp proximal
Rr613503	regulatory region 613503	1866 bp proximal