rs261039701 SNP Detail

Summary

• ID
  rs261039701
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134906654 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGGGGACG GAAGCACTGA
  CTTCCAGGCA GCAGAGAGAA AGGAACGGTT GGTCCCCTCA CCCCACCAAA TCTCCCCCAC
  CTTAAACCCC TTGCTTTGGA GAGGAATGTG GGCTGTTATT AGGAAGAACT CCCCAGCCTC
  AGGAGAGCCG CCCTTGCCCT GCCTGGAGTT TCCTCACCCA GCAGTGGCGG TGACAGTGAC
  R
  GTAGCAGCTT CCTGTCTCTG CCCTGCAGAG CCACCCTCCT GGTCACATGT ACCAGATGTT
  AGCACAGTCA CACACAGACC TTGAGCTCCC AGGCCCCACC AGAAGACAGG GACCTGGAAA
  GAAGAGCTGA GTTCTGAGGA GAAAGCTTTG GAAGCCCTCA GGCAGGCTCC CGCACTTCCC
  ACAATCAAAG GGTCCCACAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321351092	CHEV_4_134735258	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261039701					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134906654 () rs orientation: forward

Symbol	Name	Function Class
Rr601942	regulatory region 601942	within coordinates
Rr601943	regulatory region 601943	186 bp distal
Runx3	runt related transcription factor 3	1353 bp downstream