rs261012873 SNP Detail

Summary

• ID
  rs261012873
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152062836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAACCTCGT TCCCTCCTGA
  ACTGCTGTGT CTGGAGTCTG CAGTCTGTGC CCTGAGTCCC AGCACGGCTC TGTAGCGTGG
  CACACACCGC CCTGCTCTCC TCCTTTTTGT GAGAGCAAAG GAGCAGAAGG CCATGCTTAG
  GAGCAGGGTG CCATGGGGTT CTCGTGACAC AGGTGAGGGA CCATTTGAGC CCACATATGT
  Y
  CCTAGGCAGA TGTGCCCGTT TGTGGGGCAG CACACAGCCC TACACAGCTG AACGGCTTCA
  CAAACAATAC TGGTCCTCTT CAAGAAAAGT AGGAGGTCCA GCTGCTCACG TCAAGTGTCT
  GTTTTGAGGC AGGATCTCAC AGTGTGTTCT AGATGACACC ATACTTACTA TGTAGCCCAG
  GTTAGCCTTT AAGTTCATCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321433794	CHEV_4_151352488	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261012873					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152062836 () rs orientation: forward

Symbol	Name	Function Class
Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	Intron
Rr605686	regulatory region 605686	444 bp distal
Rr605687	regulatory region 605687	280 bp proximal
Rr605688	regulatory region 605688	467 bp proximal
Rr605689	regulatory region 605689	1994 bp proximal