rs260903143 SNP Detail

Summary

• ID
  rs260903143
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:96593380 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTATGTGT TTGGCAAGGC
  AACACTTATG CCCATGTTCC TCATTGCACC ATGGAACACT GCCTATCATG GCCTTTACTT
  GAATTGAAAT TTTTATTAGA TAATATTACT GGATTTATTC ATCAGTAATA TTAATTCAAA
  AATACACACT GGAAAAGTAG CTTGAAGAAG GATTAAAATG AATTCCTTTT GTCCTTTGAT
  M
  AATTTGTAAT ATTACTTGCA AGCTTCCTCA GTATGGAAAA AAGTCCCCAA CATAATGAAT
  ATAGAAGAAA TCCAATACAC TTGGGTACTT TCCTCATTCT CCTTCATGTA AACATATGCT
  TAATAAAACA CATTTTACTT GAGGATCATA AATATCGATA GTCTATTTAT AAATTCCCAA
  TGTTCAAAAG AATGTCAGAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320410854	CHEV_2_96603192	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260903143					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:96593380 () rs orientation: forward

Symbol	Name	Function Class
Lrrc4c	leucine rich repeat containing 4C	Intron
Rr561438	regulatory region 561438	237 bp proximal