rs260890259 SNP Detail

Summary

• ID
  rs260890259
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:15029783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCGATGTCT GTTTACATTG
  CTAGCGGATA CCTGCTTTAA AATTCACTGT AGTGATGCTG GGAACAAAGA TTTGTCACTA
  ACACACACCT GTGCTTAGCA GAGGATGATA TGGTGAACAC TGTCAACTTG ACAAGATCTA
  GAGTCACCTA GGAGACAAAG CTCTGGATTT GCCTGTGAGG AACTTTCTAT TCTAAGACAA
  M
  TGAGGTAGGA GACTGACCCT AAGTGTAGAT GGTGCCATCT GAGACTGAAT AAAGAGGGGA
  ACAGAAGCTG ATGCTCAGGT TTCATCTCTG CTTCCTGTCT AGGAAGCAGT GTGACTTCTA
  TGTGACAGGC TGCATCCTCA AATTGTGATT CTAATACATT TGCAAGAAAA ATAATTAACA
  CAAGGCTCAA ATTTGTGCTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320668314	CHEV_3_14964723	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260890259					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:15029783 () rs orientation: forward

Symbol	Name	Function Class
Rr573739	regulatory region 573739	699 bp proximal