rs260788911 SNP Detail

Summary

• ID
  rs260788911
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117655684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGAATTA ATAGAGCCCT
  TGGCCCCATC TTCCCTTCAA GCAGTCTCCC GGGTAGAACT GGTCACAGAT TTCAGTATGG
  TGATGGTGTC TCCTGGGGAT GTCAGACCCC ATTAAGGATC TGTAACAAAT AAAATCTGCC
  CACCACTTCA TGCCTAACCC TGTCTAACCC CCATCTCTGT GATGAGACTG TGATAGATTA
  K
  AAGACTGTGC TTTGAGATAT CGACTAGTTC TTGAGGATGG AGGAGATCAG AACCCTTATA
  AGAGAGGCAT TCGAGAGCTG CCTCCCCTCC TGCTATGAGA GAACAGAGTG AGGAGTGTCA
  TCTTGCCTCA CCAGGCAGCA AATCTGCTGG TGCTTTGATC ATGAACTTCT GGCCCCCAAA
  ACTCAGAAAT AAGTTCCTAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321923013	CHEV_6_117628741	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260788911					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117655684 () rs orientation: forward

Symbol	Name	Function Class
1700030F04Rik	RIKEN cDNA 1700030F04 gene	484 bp downstream
Rr637351	regulatory region 637351	1876 bp distal
Rr637352	regulatory region 637352	1259 bp distal
Rr637353	regulatory region 637353	94 bp distal