rs260770977 SNP Detail

Summary

• ID
  rs260770977
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:165343370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCACTTAT TTTGGCCCAG
  AACTCTCTGC TTCCTGTCTG TCATGACATG AGGTGTCTGT GACAGATTTT TGCCAGTATG
  AACTGCACCG TGTCTCTCCT GCTGTGATGA ACTGAAGTCC CCCTGAAACC ATGAGCCAAC
  CTAACCCTTC ACTCCCATAA GTCAATGCTC TTGGTTATTT TTGGCTGAGA ATTGCAAAAG
  W
  GTCTCAGGCA AGTGTGCCGT CTCCCTTGGC CTCAATTTTT TTTTATTAGA TATTTTCCTC
  ATTTACAATG GCCTCGATTT TCTTGTCCCC CAACATGGAG TTAGATTGTG GCGATTCCTA
  CCTCCTTAGG CTCCGGTGGG GTTAATGAGG AGGTAAAACA CTAACGATAT TAGGTAATTA
  TCAAAAGTAG ATTCTCTCGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320608177	CHEV_2_165326950	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260770977					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165343370 () rs orientation: forward

Symbol	Name	Function Class
Rr569936	regulatory region 569936	1847 bp proximal