rs260693509 SNP Detail

Summary

• ID
  rs260693509
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115617098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCTTTTGG GGTTTTTTTT
  TGATAAGAAT GGAGCTAAGG ACCATTTCTT TCCTTCATGA AGACTGCATT CATGTACATT
  AACAATATGG AGTGTTAAAT ACTTAATATA CTATCTGATT CCTGAAATTT TCCTCAGCTT
  TAAAAACCTT ACTATTATTC ATTTGTATAT TGTGTATGCT TATATGTACA TAGGTGCACA
  S
  ATATCATGGT ACATGCATGG AGGTGAGAAG ACGATCAATG GAGTGGACCA TCTGGGGGTG
  GAACTCAGTT CGTCTTCTGG CTTAGTGGCA AGTGCCTTCA CCCTCTGATT CATTCCACCA
  GTCCTTTCTT CATTTTTCCA ACACAGTCAC CATTTTTCCA AATTAATAAA TAAATCTTAT
  AAACATTAAG TGCCAAAACA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320893337	CHEV_3_115526367	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260693509					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115617098 () rs orientation: forward

Symbol	Name	Function Class
Rr583610	regulatory region 583610	613 bp distal