rs260607992 SNP Detail

Summary

• ID
  rs260607992
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:79104636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATCAGTGTG GCTTGAAACC TACTGTGTGG
  CCTTATTGTT ACTTCATACT CCCGGGGTGG CTCTTGGGAA ATAGCTGAGA TTTCCAGACC
  GAGGCAAGTC TGTTGTTCTC TGGAACCTGG GAGGGAAGGA AAAGGGGAGC CTAGAGGGCC
  A
  GCGTGGGTCA GGTAGGCCAT CTATAACTGT GGGATCCTCT TCTTCCTGGT GAGGGCCCAG
  GCTAGTATTT CTGGAACAAC CCTGTTGCAG GACCCACAGT GATCACTATT TAGGAAATGT
  GTCTGCAAAC AGTGTTGGGA ACACCACAGG                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323759316	CHEV_11_79027312	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260607992					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:79104636 () rs orientation: forward

Symbol	Name	Function Class
Gm11200	predicted gene 11200	567 bp downstream
Gm74268	predicted gene, 74268	783 bp downstream
Rr402771	regulatory region 402771	257 bp upstream
Rr452198	regulatory region 452198	within coordinates
Rr452199	regulatory region 452199	312 bp proximal