rs260594204 SNP Detail

Summary

• ID
  rs260594204
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:115154485 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGAACAGA AAGAACCACT TCATTCTTTT
  TTGTCACGAT CTTTCGCTGA ATATACTGAG GCACAAATAC ATGCCACAGT AAACTTAAGG
  AAAAGGTAAT TTTCATGGAA AACGACATTA TGACACTGTG AACTTCTGTT agcaggaaga
  Y
  gagtaaggcc cagctcacag gtggtttgat cttgggtaag aggagggcac ctgatttatt
  attttaacag aagtggtggg aaaactgggc aaagctaccg aaagttgtgt cgattagatg
  gtgggaagtt aggatgcatc catctggtga                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321915416	CHEV_6_115127542	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260594204					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115154485 () rs orientation: forward

Symbol	Name	Function Class
Rr636932	regulatory region 636932	1393 bp proximal
Syn2	synapsin II	Intron