rs260593904 SNP Detail

Summary

• ID
  rs260593904
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:62743933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCCCTATT TCCTGGGTGC
  CTTTGGCTGG GTAATATCTA TTTCTGGGCT CCATTTGTTA GACTTGGTTC CTGCTTCCAT
  CTTTGATCTA TTTATAAAGT CTGTTCTCTA TCCGTCAGCC AACGTGATGA AGAACGGAGG
  TGGATCACCT CACTACTAGT AATGGCTGCC CATCTCACCC AGAGAAGTAC CCAGGCCCTT
  Y
  ACAGGGCCAC ACACTCTGCC TCCTTTATCC TCAATACTGT TCTACCTCCA CACCATGAAA
  CTCTTCACGG CTGTTTCAAC ATATACATAC ATGCCTGCTG TCACCACTGT CTGAATTGTC
  CCTGAGCCCC ACTCCGCATT CTCTCTTATT TCCCCCCTCA CCTTCTCTTC GTCTTTGCTC
  AACTGTCACC ACGTCAGTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321143507	CHEV_4_62486730	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260593904					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:62743933 () rs orientation: forward

Symbol	Name	Function Class
Rr593427	regulatory region 593427	1816 bp distal