rs260465944 SNP Detail

Summary

• ID
  rs260465944
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101717872 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTGGATG GAGAACAAGA
  TCCCCAATGA ATGAGCCAGA GAAATTCCCA GGGAGCTTAA GAGGTCTGAA GCCCCATAGG
  AGAAACATCA ATATAAACTA ATCAGTATCC CAGATCTACT TGGAAACATA CCACTAATCA
  AGAAAACACA TGGTGGAACT TGTTGCTCTA GTTATATAGG TAACAAAGGA TGGCCTAGTC
  R
  GTCATCAATG GGAGGAGAGG CCCTTGGTCC TGTGAAGGCT CTATGCCCCA GTATAGGGGA
  ATGACAGGAC CAGGAATGAG AGTGGGTGGG TTGGGGAGCA GGGGGAGGGG GAAGGGGATA
  GGGGATTTTC AGAGGGGAAA CTAGGAAAGG GGATAAAATT TGGCATGTAA ATAAAGAAAA
  TATCTAATCA AAAAAAAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321231585	CHEV_4_101533280	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260465944					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101717872 () rs orientation: forward

Symbol	Name	Function Class
Rr596209	regulatory region 596209	237 bp proximal
Rr596210	regulatory region 596210	323 bp proximal
Rr596211	regulatory region 596211	407 bp proximal