rs260433762 SNP Detail

Summary

• ID
  rs260433762
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125642463 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTTTATAC AGTCAGAATA
  GCTTTCTGAA AATAAATTTG AGATTAAACA ATGTTTGAAA ACCACTCCTG ATTTCTGTTA
  GCATATGCAC CTTTGAAGAC AGGCTCTGGC AGTCTCCAGC ATAGTCTTTT CTTGACTAAA
  AGGTGTTCAT AGTACTAAAT GAATAAATTT GCTAAAAATA TAGATAATTT TGGTTTTTTG
  Y
  AGGATGCTAA TGTTCAAAGA TTTTATCTTA TTTTATTTTC TGGTCAAGTA GTTTTATGTT
  AAACATACCT TAAATGGGGA ATAAAACCAA GATAGTTTCC TGCCATTAAT TGTATGGAAA
  TGGTTTGTTG GTAATTTCAA ATAAGAAAAT GTGGGTACTG GCACATTTGT GTAAGTTGGG
  AAATATTATT CAGGGGGATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320940422	CHEV_3_125551732	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260433762					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125642463 () rs orientation: forward

Symbol	Name	Function Class
Rr584614	regulatory region 584614	426 bp proximal
Rr584615	regulatory region 584615	526 bp proximal