rs260424219 SNP Detail

Summary

• ID
  rs260424219
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:8930607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGAAGTGGC CCTAGACCTT GAAGTCTGGT
  TCTCTTATGC CCTCCAGGAC TCTCACCTCT GAGAACTTCA CCATGCCCTA GTGAAAGCAT
  GAAATAGAAC AAAGACAATA CGCCATCCAC TCTCAAAGAG CAGCCCACCA CCTCACGGCC
  Y
  ACCACCTCCT AGGGGTTTAA TAAATACTAA GACTGATGAG CTGTGCAGAT GAGCGAAACC
  TGACTGCAGT GAATTTAAGT AATAAGAGTA GATTTTCACA CTAAAGTAAA ACATAGTTGA
  ATATTTTCTT TTCTTTTCCA TCGTGAAACT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320648904	CHEV_3_8865547	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260424219					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:8930607 () rs orientation: forward

Symbol	Name	Function Class
Mrps28	mitochondrial ribosomal protein S28	Intron
Rr406711	regulatory region 406711	within coordinates
Rr407269	regulatory region 407269	550 bp proximal
Rr573330	regulatory region 573330	1741 bp distal
Rr573331	regulatory region 573331	617 bp distal
Rr573332	regulatory region 573332	within coordinates