rs260399845 SNP Detail

Summary

• ID
  rs260399845
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17900793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gagacaact ctgaagatga agcacttgct
  gtgcaagaat aatgaactga gttcagatct tcagcgtcca tacacatgct gggtgggtct
  gttgccctcc tatggttcta gcattcaaac agtagaagaa gttccctTGC TTTCTCTCAC
  R
  GGTTCATTGG CTGGTAGCCG ATAATTAGAA TATCAAAAGA CACAGTTAAA AAGATAAAAA
  CACAAGTAGA CATTTGCTAA CCTGAAGGAG GATCATATAT TTGGGATCCC TATGATGAGC
  AAGTAAGGGA CATGGTTGGA GTTTGGGTGT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320673839	CHEV_3_17746629	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260399845					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17900793 () rs orientation: forward

Symbol	Name	Function Class
Gm42187	predicted gene, 42187	within coordinates
Gm65968	predicted gene, 65968	within coordinates
Rr573861	regulatory region 573861	867 bp proximal
Rr573862	regulatory region 573862	1744 bp proximal