rs260398132 SNP Detail

Summary

• ID
  rs260398132
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138111869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTTTAAAG TCCTTTGGTA
  GGCCATCTCA TGGGGTGGCC TGTCTGGATA TTCTCTAAAG TAGGGCTGCT GGGGTCACTG
  TCCCCAGAAG GGAGCCACTG AGCAGTGATA TGGGTGAGGT GGCGACAGAC CGGGAGTTGT
  GAACACCTAT GGGAGTCACT ACTGGTTGTC ACCTTGGCAG GCTCTAGACT CACTGAGTGT
  R
  TCTCACACCT CTGAGCATGT CCCTGAGGGA GTTTCTAGAC TGGGTCGGTC ATGGGGGGAG
  AGACTGTGGT CGATACAATG CCATGGGCTG GGACTGGATA AAGCAGAGGT GGCTAGCTGA
  GTGATGGTAT TAATCTCTCT CCCTGACTTC TGATGTAATG TGACCACTCA CCATCTCTTC
  CTCTCCCGTA GCTTCTCTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321372990	CHEV_4_137940473	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260398132					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138111869 () rs orientation: forward

Symbol	Name	Function Class
Rr602903	regulatory region 602903	1887 bp distal
Rr602904	regulatory region 602904	377 bp distal