rs260298899 SNP Detail

Summary

• ID
  rs260298899
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:137820370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAGAGAAT TTGTTGAAGT
  AGAACATTAG CATAGATAGT GCGTAGGGAC GCACTCGAAT AGCAGCAGAA ATTGTTGTAG
  GATAGTGGGA TAAAATGATG AGGTGTCCTA TAAAATGCGC TGTCCTCTTT TAAAATGGCC
  TGAGCATCTG GTAAGCATGG AATACATTTA GATTCACACA AGCTGGAAAA TGGTAAACAG
  Y
  CCCTTAGCCC ACCCCAAATA GCCACTGTTA CTCTTTCTTT GTGTAGCCAC ATACTTTTTG
  CAATTTGATG CATTTAAGGA CTCTCATAAC ATGGGTAACA GTGCCCAGCA TGGTGGCTCC
  CACTCCTAAT CTCAGCACTC ATGGGGCTGA AGCAGAAGAA TTGAAACAGG TCTGAGGCTA
  CTCTGGTCTA CCCTGGAACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320522698	CHEV_2_137804186	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260298899					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:137820370 () rs orientation: forward

Symbol	Name	Function Class
Rr565959	regulatory region 565959	344 bp distal
Rr565960	regulatory region 565960	426 bp distal