rs260266102 SNP Detail

Summary

• ID
  rs260266102
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:93010815 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGGC GAGCTGCGGG ACGATTGGGG
  Y
  TGCAGCGCCG GGAGGGAGCG ACACC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320395059	CHEV_2_93020627	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260266102					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93010815 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11942	CpG island 11942	within coordinates
Gm32683	predicted gene, 32683	within coordinates
Rr561105	regulatory region 561105	1990 bp distal
Rr561106	regulatory region 561106	876 bp distal
Rr561107	regulatory region 561107	within coordinates
Tssr18977	transcription start site region 18977	781 bp upstream