rs260263948 SNP Detail

Summary

• ID
  rs260263948
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119542292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGCCCTAT AATGCTCTTC TGGCTACCCT
  CACCCTGTCC CAAATAGTAT AGTCACTGTA GGACTATGTC TTCGTTTCAG TTTCCATCCA
  AGCAGGGAAC TCACCTTCAC CCATGCACCT TGTGCAATGC TGAGCACAGC TCCCACACCC
  R
  TGGAAGAGGC GCCTTGTCTT TTGAGGTGAA TAGAGACAGA ATGGGAGCCT ACAGAGGTGA
  CGTGTCCCGC TCTGGCAGGC CTGCTGACTG TCTTTCCTGC TCTTTAGGCA ATTGTTCCAT
  GGGTGATTTG GGCCTGTTCT GTGTCTCCCT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321928721	CHEV_6_119515349	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260263948					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119542292 () rs orientation: forward

Symbol	Name	Function Class
Gm44317	predicted gene, 44317	893 bp upstream
Rr637714	regulatory region 637714	1653 bp distal
Rr637715	regulatory region 637715	189 bp proximal