rs260248014 SNP Detail

Summary

• ID
  rs260248014
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108308312 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCCTTTTC CCCATTAATC
  TAAAAATTCT AGATACTAAC CATATGTAGG AATGTGGTGA GGTTTTCCCC AAACTAGAAA
  GTCTTCGCCA CTTCCAGGAT GTTTTCTGTG ATGATTTCTG CACTCTCAGT GTCTCGTTCT
  GAAATCCTAG GGTGTCAGGG CTGTGGGTTT TACCTGCCAG TTCCTTTTCT CTTTTACTTT
  Y
  GTCCTCTCTG CTTTTACTTT TGGAGAAAGT CTCTTAACCT AGTTTCCAAA ACTTCCTGTG
  CTTAAAAACT GCATTGTCAT TGTATGCCAA GTTCCTGATT TTAAATTCCT TTCCTTTGTC
  ACAGGGTAGG GCCTCATGCA TATTTAAGAC GATAAATCCC AGTCTTACCT GTGAGGAGGC
  TGACTGTGGA TGCTTGCTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321892365	CHEV_6_108281345	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260248014					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108308312 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636077	regulatory region 636077	545 bp distal