rs260217792 SNP Detail

Summary

• ID
  rs260217792
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:8927717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATGTTTTA TTTGATATTT
  TTATTTAATA TAGTTTTTAA TGATTAGATT TTTCTTTAGG AAATTAAATG GGACGACTTT
  AAACAGGAAG GGAACGAAGG TTCCTAAAGC AACCAATCTC TCTGTCTGAG ATGATTTTAC
  GTAGAAACCT TTCAGCACAC AGAAACGTAC GCGTTTACAG TCTGGGTGTT TAGTCTGGAC
  R
  ACCAACACTG ATGCTCCTTG TACAACCCTG AGTTATCAGC CAGCCAAGAC AAATTAAAAA
  TGTGATGGCA AAACTTTGAC ATTTCAGATA TTCACAAAAC CAGCACATGG ATTTAAAAAA
  TAATATGTTT ATGATGATGC TTTATTTTTT AAAATCTGGA ATATTTTGAA TCATTGTGAA
  TTTTAACAAT AAAGCAAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320648890	CHEV_3_8862657	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260217792					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:8927717 () rs orientation: forward

Symbol	Name	Function Class
Mrps28	mitochondrial ribosomal protein S28	Intron
Rr573330	regulatory region 573330	284 bp proximal
Rr573331	regulatory region 573331	1671 bp proximal
Tssr32560	transcription start site region 32560	613 bp downstream