rs260147219 SNP Detail

Summary

• ID
  rs260147219
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17061009 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCACAGTCC AACAATGTGA GAAGGAGTCC
  TAACAGATTC TAACAGATTT CTTTGATCCT CAGTCCAACA TCACCTTCCC TTTAGCATCA
  CTGGCAGGTC CTTCTAACTC TCCAACCCCA TGCTTGCCTC ATTTGGCCCT CAATATAATT
  Y
  ACGTGGATTC AGCTCAGGTG ACTTATTCAA CCTTCCCTTC CACTGGTTTG CCTTGGGAGG
  TGTTTGGAAG CTTCTCGATC CTTCCTTTCT GTGACATCTG CTCTATCACT CCCTCTGAGC
  TTCAGTTTGT GTGTCCTGCA GAGAGGCCTT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321753421	CHEV_6_17011010	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260147219					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17061009 () rs orientation: forward

Symbol	Name	Function Class
Gm15473	predicted gene 15473	within coordinates
Rr626752	regulatory region 626752	428 bp distal
Rr626753	regulatory region 626753	1107 bp proximal
Rr626754	regulatory region 626754	1467 bp proximal