rs260072821 SNP Detail

Summary

• ID
  rs260072821
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:153650156 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAGG AGGCGTGGCT TGGAGGGAGG
  R
  GAGGGGCGGG CCTTAGACTC TAGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321031908	CHEV_3_153607483	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260072821					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153650156 () rs orientation: forward

Symbol	Name	Function Class
Acadm	acyl-Coenzyme A dehydrogenase, medium chain	mRNA-UTR
Rr587801	regulatory region 587801	within coordinates
Rr587802	regulatory region 587802	103 bp proximal
Tssr32439	transcription start site region 32439	332 bp upstream
Tssr36252	transcription start site region 36252	67 bp upstream
Tssr36253	transcription start site region 36253	5 bp upstream
Tssr36254	transcription start site region 36254	113 bp downstream