rs260039129 SNP Detail

Summary

• ID
  rs260039129
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:75846261 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgctggcca gaagagagca ccagatctca
  ttatagatga ttataagcca ccatgtggtt gctgggattt gaactcagga tctctagaag
  agcaggcagt gctcttaacc gctgagccat ctctccagcc cTGACATGGC TTTTGATAGa
  R
  acaaacaaac aaacaaacaa acaaTGGGGA GAAAATTTCA TCAGAAGTAG GAATTGGGCA
  GCTGGAAAGT TGCCACGCTA ATGCAAAGGT CGAAGCTGAC TGAAAAGGAC AGAATAAATG
  TGCCGGTGTG TCACCTCACC TGTGTGTCCC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320352405	CHEV_2_75853974	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260039129					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75846261 () rs orientation: forward

Symbol	Name	Function Class
Gm75271	predicted gene, 75271	within coordinates
Pde11a	phosphodiesterase 11A	Intron
Rr559634	regulatory region 559634	978 bp proximal