rs259964959 SNP Detail

Summary

• ID
  rs259964959
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:111536348 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATTTCTGT TGTCATTCTA TAAAAACAAA
  ATGCTAATTG TTTGATCTTA TATTTCTGAA ATGGTGTAGG TTTTTGCTTT ATGTAATTTT
  ATCCACAAAT TATTATGTTA CTGTTTTTTA ATCTGTTTTC TAGAAATTAG ATTGTCTTTG
  R
  ATCATTTTGT TTGTTTTTTA AAATCAGGAA ATAAGATTCC ATGGATGGGA AAAAAATGTT
  GCAGAAATTT TACTATCTAG CATCTCCAAT TGTAAAATCA ATGCAAACAA ATCTCAAAAA
  AGAAAAGATA AATGGAAAAC AGGTTGTTAg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321905993	CHEV_6_111509381	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259964959					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:111536348 () rs orientation: forward

Symbol	Name	Function Class
Grm7	glutamate receptor, metabotropic 7	Intron
Rr379936	regulatory region 379936	9 bp upstream
Rr636272	regulatory region 636272	269 bp proximal