rs259912567 SNP Detail

Summary

• ID
  rs259912567
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132613867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCAAGCTC TTTGGGGGAA
  GTGGGTGTTA AGATCATCAA CACTGCCTCA ATTTAGTGTC TTGTTTTATT TGGGGGGGTG
  TTCTAGACAG GGTTTCTCTG TATAGCCCTG GCTGTCCTGG AACTCACTTT GTAGACCAGG
  CTGGCCTCGA ACTCAGAAAT CCGCCTGCCT CTGCCTCCCA AGTGCTGGGA TTAAAGGCAT
  R
  CGCCACCACT GCCCGGCTTC AACTTAGAGT TTTAACGTTA GTAACATGAA GGGCTGTCCC
  TTCATTCAGT GCTCAGGGCT TCTCCAAACA AGCACATTAC AAGTGCTTTA ATTCCAGACA
  AATAGTGACT TAGATATCAG ATCTCTCCAG GTTTGTGACA TGCTAGACAG GACAATGAAA
  TGAAATATTT GGGGATCCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337135	CHEV_4_132442471	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259912567					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132613867 () rs orientation: forward

Symbol	Name	Function Class
Gm13033	predicted gene 13033	140 bp downstream
Gm70413	predicted gene, 70413	340 bp downstream
Rr601103	regulatory region 601103	1243 bp distal
Rr601104	regulatory region 601104	1104 bp proximal
Rr601105	regulatory region 601105	1288 bp proximal
Rr601106	regulatory region 601106	1398 bp proximal
Tssr43725	transcription start site region 43725	1766 bp upstream