rs259780311 SNP Detail

Summary

• ID
  rs259780311
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105441713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATCCCAGG ATTCAATTTA
  GAATACCACA TTGCGTATAG TCATCATGTT CAGTTTCCTC TGGTCTATGA CTCTCTCTCT
  CTCTCTCTCT CTTTCTCTCC TTGATGGTTC CATAGCACAG CTCTGACATT TTTGTAGAAT
  TTTCCTAAAC TTAAAGGATT TTCGTAGGAA TAGACTATGG TGAGTGAATA CCACAGAGAC
  R
  AAGGTCTTAC TCCATCCTAC CAGTGAGTAC GTGATACCAA CATAGTGTCT CTACTGATCA
  CTTGGTCACT GGGATAAAGT AGTAGTCGCC ATATCCCAGG AAAGGAGTGA CTGTGGAATT
  ATAGTCAAAG AGTCACATGA TAACAAGGAA GGCTTGTTTT TTGTTGAAGA GAAATGTTCC
  TGACTTTAAA GCTAAAGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322370592	CHEV_7_112941020	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259780311					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105441713 () rs orientation: forward

Symbol	Name	Function Class
D7Mit302	DNA segment, Chr 7, Massachusetts Institute of Technology 302	1964 bp proximal
Rr652817	regulatory region 652817	1190 bp proximal