rs259775868 SNP Detail

Summary

• ID
  rs259775868
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:136856884 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGACCTCTC TCCTACCAGT AAGTATGGCA
  AAGAATAGCC AGAGGCCTTC AGAAGCAGAT GGCTTGCATA GTTACAGTTA TGGAtttctt
  tttctttttc tttttttttt tttAATTTTC AATTACATTT CCACGGGGGG GGGGGGGGAG
  R
  AATAAGAATT CAGTCAAGAA AAATGTAGCT ATCCCTAAAA ATTTCTCACT GTTCACCAAA
  GTGCCCCAAG TCGAGACAGG TATAAATTTA ACATTACCAT ATCAGAAAAC AAAATTTGAG
  GCAGAATTCG GAAACTTGTG TGAAAATGAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320975032	CHEV_3_136814087	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259775868					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136856884 () rs orientation: forward

Symbol	Name	Function Class
Rr375787	regulatory region 375787	1600 bp upstream
Rr585922	regulatory region 585922	132 bp distal