rs259713190 SNP Detail

Summary

• ID
  rs259713190
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138110590 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGTGTAGG CGTGTGCGTG
  TTGCGGTATG GCAGAATGGG ACATCAGCCT TGGCTGGGGG TAGGGCACTC ACTTTTTCTT
  ATATATTTGC TATTTCTCTT TTTTCATGAT CTTGGGAGAG GAACTTAATG ATATTTAATA
  GATCTCTAAG GAGTCTAACA TCTAGGGCTG CATCCTGTCA GACAGATACT TAACCTCTAC
  M
  GGGGCCTTGG CTGCTCCCTA GGTGTGGTGC CCATGGCTGA ACTGTTTAAG GCAGATTTCC
  CAGGACTCAC CACCATCTAC GCCTAAGTGG GAAGAATTGG GTGGTCAGCC AATGGGATGA
  GGGCCTCGGC TGATGTGGTA GGTGGGATCT CTGGGTCTTC TGTGGTCTGG AGACTGAGTA
  AGACAGAGAG GGACTCTGTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321372984	CHEV_4_137939194	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259713190					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138110590 () rs orientation: forward

Symbol	Name	Function Class
Rr602903	regulatory region 602903	608 bp distal
Rr602904	regulatory region 602904	441 bp proximal