rs259705484 SNP Detail

Summary

• ID
  rs259705484
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:99048921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTTCAACC TGCTAAATAG AGCGCAGTCT
  TAGTTATCCC AAGCAAGTGA GGCAAAATGA ACTTCCATTC TTTTGTGATG ACTCCTCAGC
  AAGCACAAGT CAGTTAATCT GTTGCCTAGG TTACCAGCCA CGGAGGGGCG GGGGGGGGGG
  R
  GGGGGGACCA GCCAAAGGGA GACAAAAACA AGGGCAGTCC CAATTTTTTG GTTATTGTGA
  AAGATGCCAC AATAATGCTG TCTCTTCATG AAAAACAAGA CTTCTAGCTC AAGATCCTTC
  AGGGAATTTC TGTCTTAGGA AATAAGAGGG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321222991	CHEV_4_98827375	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259705484					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:99048921 () rs orientation: forward

Symbol	Name	Function Class
Gm12681	predicted gene 12681	within coordinates
Rr376904	regulatory region 376904	261 bp upstream
Rr595834	regulatory region 595834	within coordinates
Rr595835	regulatory region 595835	684 bp proximal
Rr595836	regulatory region 595836	948 bp proximal
Tssr37925	transcription start site region 37925	1903 bp downstream