rs259653675 SNP Detail

Summary

• ID
  rs259653675
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137525884 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAAGCTGTT TGGTCCAGAA CATTTGTAAA
  TGGAGCCCAG ATTCTGCAGG GCCAGGCCTG CTCAGCCGGT GGAAGCAGCC CCTTACATAG
  AACTCTCGCC GTCTTTTCTC CAGGGTACGA TTCCGAGAAA TAGGAAATGG CACCACCTGA
  M
  CTCCAAGCTC CCGTGCCTGA GAGCTGTTCG TTCTTTCTCT TTGTCCATAT TGACTTCATG
  CCATGAGCTC CCTGCTTGAA GTAAGGCCCA AGTTTCATAG TCACagctgg gttgactcac
  acacctgtaa tcctaatatt cagagggttg                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321367554	CHEV_4_137354488	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259653675					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137525884 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15139	CpG island 15139	1871 bp distal
Rr377269	regulatory region 377269	1993 bp upstream
Rr602726	regulatory region 602726	1699 bp distal
Rr602728	regulatory region 602728	1661 bp proximal