rs259626171 SNP Detail

Summary

• ID
  rs259626171
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106642336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAGGCTGG TAAGTGCTCT
  CCACATGCCA GTGTTGCAGA CCCCGCCCAC CATGCCAGCT GCGTTTACTT CTTTAATCTT
  CACACCGCCC TAATAGCTGG GTGTCCCATT CCCATTTTAC AGATGGGGAA GCAGAGGCTC
  AAGAAGAGTA AACAGCTTAC ACATACACAC ATAGGATCAC CCATCTGATA AGGACAGAAC
  Y
  GAGACCTAGG TCCACACTTG TGTAGCTCAG AATCCAAGGC TGCTCGACCG TTTTGAAGTA
  CTACCGCTCG TCTAGCAGAC AGGATAGTCA TTTATGTCTC TGGGCATTTG ATCCCACCAC
  AGGTAGGCCA AGCCAGCACC CACATCTCTA TTCTGGTTTC CTGAGACTCC TCCTCATGTC
  CCTTTAAGCC CTCTTGCAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321247208	CHEV_4_106457744	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259626171					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106642336 () rs orientation: forward

Symbol	Name	Function Class
Acot11	acyl-CoA thioesterase 11	Intron
Rr596808	regulatory region 596808	204 bp proximal