rs259618094 SNP Detail

Summary

• ID
  rs259618094
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:103121120 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTTCCCTT GCTGCTCAGA
  CGCTGAGCTA ACCACTATAT GCCCGGCTGC AGATGCTGTA TTTCTTGTGA GGCCAATATG
  AGTTATTATG AACAATAGGA AAGAATAGGA ATCAGATATG GGTCCTTTGT ATTCTAGTAT
  GAGAACATAT TCATACTTGC TATCATGCAT TAGAAGCAGC GCAGCCAGGC ACACTGCTCA
  C
  GCTTTGTTTG TTCTGAGTTA ACCTTTCATG TAGATATAGC CCGGGTGATG ACTCAGGAAA
  AATGCAGGAC TTGGAAGCCT TAGGTGTATG TAAGCGTCTC CCTACAGAGA GAGCTGATAA
  TGACGGGAAG GTGCAGGGAG CGATAAGAAA AGTACTAACA TCATGAATCT CAGGGACAGG
  CTGGCTCCCC AACCCGAAGC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321236331	CHEV_4_102936528	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259618094					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:103121120 () rs orientation: forward

Symbol	Name	Function Class
4921539E11Rik	RIKEN cDNA 4921539E11 gene	Intron
Rr596382	regulatory region 596382	within coordinates
Rr596383	regulatory region 596383	1333 bp proximal