rs259567348 SNP Detail

Summary

• ID
  rs259567348
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101052366 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGAAGCCA GACCTGCAGC
  CAACTTGTAG AAGAGATTGG AATGCAGGGA TCAGGACCAG GGGACCACAG AAACAAGGAC
  AGGGTTGTTC AGAGTAGAGG GAGAGGAGGG TGCTGGAGGG GGTGGGGTGG GGGGGCTGTG
  CTGAGCTGCT GCTGGCTAGA TGCTGAGGAA GGTGATGGAG AAAGGGAGAA GGAGGTAAGG
  T
  ACTTCCTGGA GACCTAAGGA AAGGACCCCA GCAGGTGCTT CCTTGCAATT CTTTTGCCTA
  AATCAGCTTC TACTTCCCAG GGTATCTGCC CTGTGTGCTC CCTTACACTT AATATAAATA
  CAAAGTGTTT AAGGTTGGAG GTGGCAGGGG GCTTCCTAAT TGTGATGGAC TCACCTCACT
  CCAGACACAG ATGTATTTTC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851102	CHEV_3_100948973	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259567348					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101052366 () rs orientation: forward

Symbol	Name	Function Class
Rr581969	regulatory region 581969	within coordinates