rs259432959 SNP Detail

Summary

• ID
  rs259432959
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144678598 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAAATCAT TTTTAAAAGT
  GTTCAACATC GTTGGCCATC AGAGAAATCA AACTGAAACC ACACTGAGAT TCCATCTCAC
  CCCAGTCAGA ACGCCTATCA TCAAGAAAAC AAATAACAAC AAATGCTGGG GCAACCACTA
  TGGAAACCAA TCTGGATGTG TCTCAAAAAG CTAAAAATAG AACTTCCATA TGACCCAGGC
  R
  TGATACTCCT GGGCATGTAT CCCAAACGCT CCAGTCTTCC GAGGGAGAAA CTTACTCATC
  AGGCTCATTA CCGCTCTGCT TGCAATAGCT AGGGAATGGA ATCAACGTAG ATATCCATGA
  GCCAATGAGT GGGAAACCAA AATAAACACA ATGGGCTTTT ATTTATCTAT GAGGAAAAAT
  GAAATCTTTG GAAAACAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321411035	CHEV_4_144541931	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259432959					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144678598 () rs orientation: forward

Symbol	Name	Function Class
Gm42344	predicted gene, 42344	within coordinates
Gm69556	predicted gene, 69556	within coordinates
Rr604271	regulatory region 604271	1256 bp distal
Rr604272	regulatory region 604272	within coordinates
Rr604273	regulatory region 604273	1605 bp proximal